Empowering Virus Sequences Research through Conceptual Modeling
Summary
other
Anna Bernasconi
Work
Politecnico di Milano
|Research Fellow
Italy
→
Politecnico di Milano
|Postdoctoral Researcher
Italy
→
Politecnico di MILANO
|Ricercatori a tempo determinato
Italy
→
Politecnico di MILANO
|Collaboratori
Italy
→
Politecnico di MILANO
|Assegnisti
Italy
→
Politecnico di MILANO
|Collaboratori
Italy
→
Politecnico di MILANO
|Dottorandi
Italy
→
Politecnico di Milano
|PhD Candidate
Italy
→
Politecnico di MILANO
|Personale esterno ed autonomi
Italy
→
Politecnico di MILANO
|Collaboratori
Italy
→
Politecnico di MILANO
|Collaboratori
Italy
→
Education
Politecnico di Milano
Italy
→
PhD
University of Illinois at Chicago
United States of America
→
Master of Science in Computer Science
Politecnico di Milano
Italy
→
Master of Science in Computer Engineering
Publications
A Review on Viral Data Sources and Integration Methods for COVID-19 Mitigation
Summary
working-paper
Leveraging Profiling to Bridge Healthcare Silos for Federated Analyses
Published by
Lecture Notes in Business Information Processing
Summary
journal-article
Mine Graph Rule: A New GQL Operator for Mining Association Rules in Property Graph Databases
Summary
journal-article
Is SARS-CoV-2 Spike Evolution Being Retargeted at the N-Terminal Domain?
Summary
journal-article
Special issue on big data computing service and machine learning applications
Summary
journal-article
TETYS: Configurable Topic Modeling Exploration for Big Corpora of Text Documents
Summary
conference-paper
Transformer-Based Biomedical Text Extraction
Summary
book-chapter
Multi-scale early warning system for influenza A spillovers
Published by
BioRxiv
Summary
journal-article
Enabling Light-Weight Reasoning via Cypher Triggers
Summary
conference-paper
Biological and Medical Ontologies: Human Phenotype Ontology (HPO)
Summary
book-chapter
An LLM-assisted ETL pipeline to build a high-quality knowledge graph of the Italian legislation
Summary
journal-article
Capturing research literature attitude towards sustainable development goals: an LLM-based topic modeling approach
Summary
journal-article
Capturing research literature attitude towards sustainable development goals: an LLM-based topic modeling approach
Published by
Journal of Big Data
Summary
journal-article
Conceptual Modeling for Bioinformatics
Summary
book-chapter
Data-Driven Methods for Viral Variants’ Identification
Summary
book-chapter
A codon usage-based approach for the stratification of Influenza A across recent spillovers
Summary
journal-article
Biological and Medical Ontologies: Disease Ontology (DO)
Summary
book-chapter
Leveraging Profiling to Bridge Healthcare Silos for Federated Analyses
Summary
book-chapter
Exploring the evolution of research topics during the COVID-19 pandemic
Summary
journal-article
MINE GRAPH RULE: A New Cypher-like Operator for Mining Association Rules on Property Graphs
Published by
ArXiv
Summary
journal-article
MINE GRAPH RULE: A New Cypher-like Operator for Mining Association Rules on Property Graphs
Published by
arXiv
Summary
other
Modelling Legislative Systems into Property Graphs to Enable Advanced Pattern Detection
Published by
ArXiv
Summary
journal-article
Modelling Legislative Systems into Property Graphs to Enable Advanced Pattern Detection
Published by
arXiv
Summary
other
PG-Triggers: Triggers for Property Graphs
Published by
Proceedings of the ACM SIGMOD International Conference on Management of Data
Summary
conference-paper
PG-Triggers: Triggers for Property Graphs
Summary
conference-paper
PG-Triggers: Triggers for Property Graphs
Published by
ArXiv
Summary
journal-article
SENSIBLE: Implementing Data-Driven Early Warning Systems for Future Viral Epidemics
Published by
CEUR Workshop Proceedings
Summary
conference-paper
SENSIBLE: Implementing Data-Driven Early Warning Systems for Future Viral Epidemics
Summary
conference-paper
Searching COVID-19 Clinical Research Using Graph Queries: Algorithm Development and Validation
Published by
Journal of Medical Internet Research
Summary
journal-article
ConvMut: A Web tool to analyze viral convergent mutations along phylogenies
Published by
BioRxiv
Summary
journal-article
Searching COVID-19 Clinical Research Using Graph Queries: Algorithm Development and Validation
Summary
journal-article
TETYS: Towards the Next-Generation Open-Source Web Topic Explorer
Published by
CEUR Workshop Proceedings
Summary
conference-paper
TETYS: Towards the Next-Generation Open-Source Web Topic Explorer
Summary
conference-paper
Towards an Explorable Conceptual Map of Large Language Models
Published by
Lecture Notes in Business Information Processing
Summary
conference-paper
Towards an Explorable Conceptual Map of Large Language Models
Summary
conference-paper
Searching COVID-19 Clinical Research Using Graph Queries: Algorithm Development and Validation
Published by
ArXiv
Summary
journal-article
A Conceptual Approach to Using Relevant Patterns in Genomic Data Analysis
Summary
conference-paper
A Conceptual Approach to Using Relevant Patterns in Genomic Data Analysis
Published by
CEUR Workshop Proceedings
Summary
conference-paper
Advancing healthcare through data: the BETTER project's vision for distributed analytics
Summary
journal-article
Advancing healthcare through data: the BETTER project's vision for distributed analytics
Published by
Frontiers in Medicine
Summary
journal-article
Reactive Knowledge Management
Summary
conference-paper
Reactive Knowledge Management
Published by
Proceedings - International Conference on Data Engineering
Summary
conference-paper
Systematic analysis of SARS-CoV-2 Omicron subvariants’ impact on B and T cell epitopes
Summary
journal-article
Systematic analysis of SARS-CoV-2 Omicron subvariants' impact on B and T cell epitopes
Published by
PLoS ONE
Summary
journal-article
Towards a Standard for Triggers in Property Graphs
Summary
conference-paper
Towards a Standard for Triggers in Property Graphs
Published by
CEUR Workshop Proceedings
Summary
conference-paper
VarClaMM: A reference meta-model to understand DNA variant classification
Summary
journal-article
VarClaMM: A reference meta-model to understand DNA variant classification
Published by
Data and Knowledge Engineering
Summary
journal-article
Achieving data FAIRification in a distributed analytics research platform for rare diseases
Published by
CEUR Workshop Proceedings
Summary
conference-paper
Capturing research literature attitude towards Sustainable Development Goals: an LLM-based topic modeling approach
Published by
ArXiv
Summary
journal-article
Capturing research literature attitude towards Sustainable Development Goals: an LLM-based topic modeling approach
Published by
arXiv
Summary
other
Data-driven recombination detection in viral genomes
Published by
Nature Communications
Summary
journal-article
Data-driven recombination detection in viral genomes
Summary
journal-article
Exploring the evolution of research topics during the COVID-19 pandemic
Published by
Expert Systems with Applications
Summary
journal-article
VariantHunter: a method and tool for fast detection of emerging SARS-CoV-2 variants
Summary
journal-article
Viral Sequences Data Management Resources
Published by
Lecture Notes in Business Information Processing
Summary
book-chapter
Viral Sequences Data Management Resources
Summary
book-chapter
SARS-CoV-2 viremia and COVID-19 mortality: A prospective observational study
Summary
journal-article
CoVEffect: interactive system for mining the effects of SARS-CoV-2 mutations and variants based on deep learning
Summary
journal-article
Searching COVID-19 clinical research using graphical abstracts
Published by
ArXiv
Summary
journal-article
A Reference Meta-model to Understand DNA Variant Interpretation Guidelines
Published by
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Summary
conference-paper
A Reference Meta-model to Understand DNA Variant Interpretation Guidelines
Summary
conference-paper
Assessing the value of ontologically unpacking a conceptual model for human genomics
Published by
Information Systems
Summary
journal-article
Assessing the value of ontologically unpacking a conceptual model for human genomics
Summary
journal-article
Conclusions and Vision
Published by
Lecture Notes in Business Information Processing
Summary
book-chapter
Conclusions and Vision
Summary
book-chapter
Correction: Processing genome-wide association studies within a repository of heterogeneous genomic datasets (BMC Genomic Data, (2023), 24, 1, (13), 10.1186/s12863-023-01111-y)
Published by
BMC Genomic Data
Summary
journal-article
Processing genome-wide association studies within a repository of heterogeneous genomic datasets (vol 24, 13, 2023)
Published by
BMC Genomic Data
Summary
journal-article
Data-driven recombination detection in viral genomes
Published by
bioRxiv
Summary
other
Data-driven recombination detection in viral genomes
Published by
BioRxiv
Summary
journal-article
Editorial: Identification of phenotypically important genomic variants
Published by
Frontiers in Bioinformatics
Summary
journal-article
Editorial: Identification of phenotypically important genomic variants
Summary
journal-article
Erratum to: Mapping the human genetic architecture of COVID-19 (Nature, (2021), 600, 7889, (472-477), 10.1038/s41586-021-03767-x)
Published by
Nature
Summary
journal-article
Exploring the evolution of research topics during the COVID-19 pandemic
Published by
ArXiv
Summary
journal-article
Exploring the evolution of research topics during the COVID-19 pandemic
Published by
arXiv
Summary
other
Future Directions of the Data Repository
Published by
Lecture Notes in Business Information Processing
Summary
book-chapter
Future Directions of the Data Repository
Summary
book-chapter
Future Directions of the Viral Sequence Repository
Published by
Lecture Notes in Business Information Processing
Summary
book-chapter
Future Directions of the Viral Sequence Repository
Summary
book-chapter
Genomic Data Players and Processes
Published by
Lecture Notes in Business Information Processing
Summary
book-chapter
Genomic Data Players and Processes
Summary
book-chapter
Integrating Genomic Data
Published by
Lecture Notes in Business Information Processing
Summary
book-chapter
Integrating Genomic Data
Summary
book-chapter
Integrating Viral Sequence Data
Published by
Lecture Notes in Business Information Processing
Summary
book-chapter
Integrating Viral Sequence Data
Summary
book-chapter
Introduction
Published by
Lecture Notes in Business Information Processing
Summary
book-chapter
Introduction
Summary
book-chapter
Modeling Genomic Data
Published by
Lecture Notes in Business Information Processing
Summary
book-chapter
Modeling Genomic Data
Summary
book-chapter
Modeling Viral Sequence Data
Published by
Lecture Notes in Business Information Processing
Summary
book-chapter
Modeling Viral Sequence Data
Summary
book-chapter
OntoEffect: An OntoUML-Based Ontology to Explain SARS-CoV-2 Variants’ Effects
Published by
International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management, IC3K - Proceedings
Summary
conference-paper
OntoEffect: An OntoUML-Based Ontology to Explain SARS-CoV-2 Variants' Effects
Summary
conference-paper
Ontological Representation of FAIR Principles: A Blueprint for FAIRer Data Sources
Published by
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Summary
conference-paper
Ontological Representation of FAIR Principles: A Blueprint for FAIRer Data Sources
Summary
conference-paper
PG-Triggers: Triggers for Property Graphs
Published by
arXiv
Summary
other
PoliViews: A comprehensive and modular approach to the conceptual modeling of genomic data
Published by
Data and Knowledge Engineering
Summary
journal-article
PoliViews: A comprehensive and modular approach to the conceptual modeling of genomic data
Summary
journal-article
Processing genome-wide association studies within a repository of heterogeneous genomic datasets
Published by
BMC Genomic Data
Summary
journal-article
Processing genome-wide association studies within a repository of heterogeneous genomic datasets
Summary
journal-article
Processing genome-wide association studies within a repository of heterogeneous genomic datasets
Published by
BMC Genomic Data
Summary
journal-article
SARS-CoV-2 viremia and COVID-19 mortality: A prospective observational study
Published by
PLoS ONE
Summary
journal-article
Searching COVID-19 Clinical Research Using Graph Queries: Algorithm Development and Validation
Published by
arXiv
Summary
other
Searching Genomic Data
Published by
Lecture Notes in Business Information Processing
Summary
book-chapter
Searching Genomic Data
Summary
book-chapter
Searching Viral Sequence Data
Published by
Lecture Notes in Business Information Processing
Summary
book-chapter
Searching Viral Sequence Data
Summary
book-chapter
Snapshot of the Data Repository
Published by
Lecture Notes in Business Information Processing
Summary
book-chapter
Snapshot of the Data Repository
Summary
book-chapter
The Opportunity of Data-Driven Services for Viral Genomic Surveillance
Published by
Proceedings - 17th IEEE International Conference on Service-Oriented System Engineering, SOSE 2023
Summary
conference-paper
The Opportunity of Data-Driven Services for Viral Genomic Surveillance
Summary
conference-paper
VariantHunter: a method and tool for fast detection of emerging SARS-CoV-2 variants
Published by
Database
Summary
journal-article
A Sound and Repeatable Approach to Building Integrated Repositories of Genomic Data
Summary
conference-paper
Model, Integrate, Search... Repeat
Summary
book
Expressing Biological Problems with Logical Reasoning Languages
Published by
CEUR Workshop Proceedings
Summary
conference-paper
Conceptual models and databases for searching the genome
Summary
conference-paper
Interoperability of COVID-19 Clinical Phenotype Data with Host and Viral Genetics Data
Published by
BioMed
Summary
journal-article
Interoperability of COVID-19 Clinical Phenotype Data with Host and Viral Genetics Data
Summary
journal-article
A Comprehensive Approach for the Conceptual Modeling of Genomic Data
Published by
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Summary
conference-paper
A Comprehensive Approach for the Conceptual Modeling of Genomic Data
Summary
conference-paper
An Initial Empirical Assessment of an Ontological Model of the Human Genome
Published by
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Summary
conference-paper
An Initial Empirical Assessment of an Ontological Model of the Human Genome
Summary
conference-paper
An Ontological Characterization of a Conceptual Model of the Human Genome
Published by
Lecture Notes in Business Information Processing
Summary
book-chapter
Analysis of co-occurring and mutually exclusive amino acid changes and detection of convergent and divergent evolution events in SARS-CoV-2
Published by
Computational and Structural Biotechnology Journal
Summary
journal-article
Analysis of co-occurring and mutually exclusive amino acid changes and detection of convergent and divergent evolution events in SARS-CoV-2
Summary
journal-article
CoV2K model, a comprehensive representation of SARS-CoV-2 knowledge and data interplay
Published by
Scientific Data
Summary
journal-article
CoV2K model, a comprehensive representation of SARS-CoV-2 knowledge and data interplay
Published by
Scientific Data
Summary
journal-article
CoV2K model, a comprehensive representation of SARS-CoV-2 knowledge and data interplay
Summary
journal-article
CoVEffect: interactive system for mining the effects of SARS-CoV-2 mutations and variants based on deep learning
Published by
GigaScience
Summary
journal-article
An Ontological Characterization of a Conceptual Model of the Human Genome
Summary
conference-paper
Expressing Biological Problems with Logical Reasoning Languages
Summary
conference-paper
GeCoAgent: A Conversational Agent for Empowering Genomic Data Extraction and Analysis
Published by
ACM Transactions on Computing for Healthcare
Summary
journal-article
GeCoAgent: A Conversational Agent for Empowering Genomic Data GeCoAgent: A Conversational Agent for Empowering Genomic Data Extraction and Analysis Extraction and Analysis
Published by
ACM Transactions on Computing for Healthcare
Summary
journal-article
GeCoAgent: A Conversational Agent for Empowering Genomic Data Extraction and Analysis
Summary
journal-article
GeMI: interactive interface for transformer-based Genomic Metadata Integration
Published by
Database
Summary
journal-article
GeMI: interactive interface for transformer-based Genomic Metadata Integration
Published by
Database
Summary
journal-article
GeMI: interactive interface for transformer-based Genomic Metadata Integration
Summary
journal-article
Genomic data integration and user-defined sample-set extraction for population variant analysis
Published by
BMC Bioinformatics
Summary
journal-article
Genomic data integration and user-defined sample-set extraction for population variant analysis
Summary
journal-article
META-BASE: A Novel Architecture for Large-Scale Genomic Metadata Integration
Published by
IEEE/ACM Transactions on Computational Biology and Bioinformatics
Summary
journal-article
META-BASE: A Novel Architecture for Large-Scale Genomic Metadata Integration
Published by
IEEE Transactions on Computational Biology and Bioinformatics
Summary
journal-article
META-BASE: a Novel Architecture for Large-Scale Genomic Metadata Integration
Summary
journal-article
Model, Integrate, Search.. Repeat: A Sound Approach to Building Integrated Repositories of Genomic Data
Published by
SpringerBriefs in Applied Sciences and Technology
Summary
book-chapter
Model, Integrate, Search... Repeat: A Sound Approach to Building Integrated Repositories of Genomic Data
Summary
book-chapter
Scenarios for the Integration of Microarray Gene Expression Profiles in COVID-19–Related Studies
Published by
Methods in Molecular Biology
Summary
book-chapter
Scenarios for the Integration of Microarray Gene Expression Profiles in COVID-19-Related Studies
Summary
book-chapter
Semantic interoperability: ontological unpacking of a viral conceptual model
Published by
BMC Bioinformatics
Summary
journal-article
Semantic interoperability: ontological unpacking of a viral conceptual model
Summary
journal-article
ViruClust: Direct comparison of SARS-CoV-2 genomes and genetic variants in space and time
Published by
Bioinformatics
Summary
journal-article
ViruClust: direct comparison of SARS-CoV-2 genomes and genetic variants in space and time
Published by
Bioinformatics
Summary
journal-article
ViruClust: Direct comparison of SARS-CoV-2 genomes and genetic variants in space and time
Summary
journal-article
A Conceptual Model for Geo-Online Exploratory Data Visualization: The Case of the COVID-19 Pandemic
Summary
journal-article
A review on viral data sources and search systems for perspective mitigation of COVID-19
Published by
Briefings in Bioinformatics
Summary
journal-article
A review on viral data sources and search systems for perspective mitigation of COVID-19
Published by
Briefings in Bioinformatics
Summary
journal-article
A review on viral data sources and search systems for perspective mitigation of COVID-19
Summary
journal-article
Analysis of amino acid change dynamics reveals SARS-CoV-2 variant emergence
Published by
bioRxiv
Summary
other
Automated Integration of Genomic Metadata with Sequence-to-Sequence Models
Published by
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Summary
conference-paper
Automated Integration of Genomic Metadata with Sequence-to-Sequence Models
Published by
Lecture Notes in Computer Science
Summary
journal-article
Geo-online explanatory data visualization tools as crisis management and communication instruments
Summary
conference-paper
A conceptual model for geo-online exploratory data visualization: The case of the covid-19 pandemic
Published by
Information (Switzerland)
Summary
journal-article
Automated Integration of Genomic Metadata with Sequence-to-Sequence Models
Summary
conference-paper
CoV2K: A Knowledge Base of SARS-CoV-2 Variant Impacts
Published by
Lecture Notes in Business Information Processing
Summary
conference-paper
CoV2K: A Knowledge Base of SARS-CoV-2 Variant Impacts
Summary
conference-paper
Data quality-aware genomic data integration
Published by
Computer Methods and Programs in Biomedicine Update
Summary
journal-article
Data quality-aware genomic data integration
Summary
journal-article
Data-driven analysis of amino acid change dynamics timely reveals SARS-CoV-2 variant emergence
Published by
Scientific Reports
Summary
journal-article
Data-driven analysis of amino acid change dynamics timely reveals SARS-CoV-2 variant emergence
Published by
Scientific Reports
Summary
journal-article
Data-driven analysis of amino acid change dynamics timely reveals SARS-CoV-2 variant emergence
Summary
journal-article
EpiSurf: Metadata-driven search server for analyzing amino acid changes within epitopes of SARS-CoV-2 and other viral species
Published by
Database
Summary
journal-article
EpiSurf: metadata-driven search server for analyzing amino acid changes within epitopes of SARS-CoV-2 and other viral species
Published by
Database
Summary
journal-article
EpiSurf: Metadata-driven search server for analyzing amino acid changes within epitopes of SARS-CoV-2 and other viral species
Summary
journal-article
Extreme Requirements Elicitation: Lessons Learnt from the COVID-19 Case Study
Published by
CEUR Workshop Proceedings
Summary
conference-paper
Extreme Requirements Elicitation: Lessons Learnt from the COVID-19 Case Study
Summary
conference-poster
Mapping the human genetic architecture of COVID-19
Published by
Nature
Summary
journal-article
Mapping the human genetic architecture of COVID-19
Summary
journal-article
Ontological Unpacking as Explanation: The Case of the Viral Conceptual Model
Published by
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Summary
conference-paper
Ontological Unpacking as Explanation: The Case of the Viral Conceptual Model
Published by
Lecture Notes in Computer Science
Summary
journal-article
Ontological Unpacking as Explanation: The Case of the Viral Conceptual Model
Summary
conference-paper
TOrPEDO: witnessing model correctness with topological proofs
Published by
Formal Aspects of Computing
Summary
journal-article
TOrPEDO: witnessing model correctness with topological proofs
Published by
Formal Aspects of Computing
Summary
journal-article
TOrPEDO: witnessing model correctness with topological proofs
Summary
journal-article
The road towards data integration in human genomics: Players, steps and interactions
Published by
Briefings in Bioinformatics
Summary
journal-article
The road towards data integration in human genomics: players, steps and interactions
Published by
Briefings in Bioinformatics
Summary
journal-article
The road towards data integration in human genomics: players, steps and interactions
Summary
journal-article
Using symptom-based case predictions to identify host genetic factors that contribute to COVID-19 susceptibility
Published by
PLoS ONE
Summary
journal-article
ViruSurf: An integrated database to investigate viral sequences
Published by
Nucleic Acids Research
Summary
journal-article
ViruSurf: an integrated database to investigate viral sequences
Published by
Nucleic Acids Research
Summary
journal-article
ViruSurf: an integrated database to investigate viral sequences
Summary
journal-article
VirusViz: Comparative analysis and effective visualization of viral nucleotide and amino acid variants
Published by
Nucleic Acids Research
Summary
journal-article
VirusViz: comparative analysis and effective visualization of viral nucleotide and amino acid variants
Published by
Nucleic Acids Research
Summary
journal-article
VirusViz: comparative analysis and effective visualization of viral nucleotide and amino acid variants
Summary
journal-article
Viruslab: A tool for customized sars-cov-2 data analysis
Published by
BioTech
Summary
journal-article
VirusLab: A Tool for Customized SARS-CoV-2 Data Analysis
Published by
BioTech
Summary
journal-article
Viruslab: A tool for customized sars-cov-2 data analysis
Summary
journal-article
A Conceptual Model for Geo-Online Exploratory Data Visualization: The Case of the COVID-19 Pandemic
Published by
Information
Summary
journal-article
Integrating topological proofs with model checking to instrument iterative design
Published by
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Summary
conference-paper
Risk perception, spatial data, legal response during COVID-19 pandemic: a conceptual model
Summary
journal-article
Convergence of web design and spatial, statistical, genomic and epidemiological information: The case of geo-dashboards in the Covid-19 crisis,Convergenza di web design e informazione spaziale, statistica, genomica ed epidemiologica: Il caso delle geo-dashboard nella crisi Covid-19
Published by
Documenti Geografici
Summary
journal-article
Convergence of web design and spatial, statistical, genomic and epidemiological information: the case of geo-dashboards in the Covid-19 crisis
Published by
Documenti Geografici
Summary
journal-article
Convergence of web design and spatial, statistical, genomic and epidemiological information: the case of geo-dashboards in the Covid-19 crisis
Summary
journal-article
Empowering Virus Sequence Research Through Conceptual Modeling
Published by
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Summary
conference-paper
Empowering Virus Sequence Research Through Conceptual Modeling
Published by
Lecture Notes in Computer Science
Summary
journal-article
Empowering Virus Sequence Research Through Conceptual Modeling
Summary
conference-paper
Empowering virus sequences research through conceptual modeling
Published by
bioRxiv
Summary
other
Integrating Topological Proofs with Model Checking to Instrument Iterative Design
Published by
Fundamental Approaches to Software Engineering
Summary
other
Integrating Topological Proofs with Model Checking to Instrument Iterative Design
Published by
Lecture Notes in Computer Science
Summary
journal-article
Integrating topological proofs with model checking to instrument iterative design
Summary
conference-paper
OpenGDC: Unifying, modeling, integrating cancer genomic data and clinical metadata
Published by
Applied Sciences (Switzerland)
Summary
journal-article
OpenGDC: Unifying, Modeling, Integrating Cancer Genomic Data and Clinical Metadata
Published by
Applied Sciences
Summary
journal-article
OpenGDC: Unifying, Modeling, Integrating Cancer Genomic Data and Clinical Metadata
Published by
Applied Sciences
Summary
journal-article
OpenGDC: Unifying, Modeling, Integrating Cancer Genomic Data and Clinical Metadata
Summary
journal-article
Using symptom-based case predictions to identify host genetic factors that contribute to COVID-19 susceptibility
Published by
medRxiv
Summary
other
ViruSurf: An integrated database to investigate viral sequences
Published by
bioRxiv
Summary
other
GenoSurf: metadata driven semantic search system for integrated genomic datasets
Published by
Database
Summary
journal-article
Exploiting Conceptual Modeling for Searching Genomic Metadata: A Quantitative and Qualitative Empirical Study
Published by
Lecture Notes in Computer Science
Summary
book-chapter
Exploiting conceptual modeling for searching genomic metadata: a quantitative and qualitative empirical study
Published by
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Summary
conference-paper
Exploiting Conceptual Modeling for Searching Genomic Metadata: A Quantitative and Qualitative Empirical Study
Published by
Lecture Notes in Computer Science
Summary
journal-article
Exploiting Conceptual Modeling for Searching Genomic Metadata: A Quantitative and Qualitative Empirical Study
Summary
conference-paper
From a Conceptual Model to a Knowledge Graph for Genomic Datasets
Published by
Conceptual Modeling
Summary
book-chapter
From a conceptual model to a knowledge graph for genomic datasets
Published by
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Summary
conference-paper
From a Conceptual Model to a Knowledge Graph for Genomic Datasets
Published by
Lecture Notes in Computer Science
Summary
journal-article
From a Conceptual Model to a Knowledge Graph for Genomic Datasets
Summary
conference-paper
GenoSurf: metadata driven semantic search system for integrated genomic datasets
Published by
Database : the journal of biological databases and curation
Summary
journal-article
Genomic big data management, modeling and computing
Summary
conference-paper
GenoSurf: metadata driven semantic search system for integrated genomic datasets
Published by
Database
Summary
journal-article
GenoSurf: metadata driven semantic search system for integrated genomic datasets
Summary
journal-article
Processing of big heterogeneous genomic datasets for tertiary analysis of Next Generation Sequencing data
Published by
Bioinformatics
Summary
journal-article
Processing of big heterogeneous genomic datasets for tertiary analysis of Next Generation Sequencing data
Published by
Bioinformatics
Summary
journal-article
Processing of big heterogeneous genomic datasets for tertiary analysis of Next Generation Sequencing data
Summary
journal-article
Using GMQL-web for querying, downloading and integrating public with private genomic datasets
Published by
ACM-BCB 2019 - Proceedings of the 10th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics
Summary
conference-paper
Using metadata for locating genomic datasets on a global scale
Published by
CEUR Workshop Proceedings
Summary
conference-paper
Using metadata for locating genomic datasets on a global scale
Summary
conference-paper
Biological and Medical Ontologies: Disease Ontology (DO)
Published by
Encyclopedia of Bioinformatics and Computational Biology
Summary
other
Biological and Medical Ontologies: Disease Ontology (DO)
Summary
book-chapter
Biological and Medical Ontologies: Human Phenotype Ontology (HPO)
Published by
Encyclopedia of Bioinformatics and Computational Biology
Summary
other
Biological and Medical Ontologies: Human Phenotype Ontology (HPO)
Summary
book-chapter
Biological and Medical Ontologies: Systems Biology Ontology (SBO)
Published by
Encyclopedia of Bioinformatics and Computational Biology
Summary
other
Biological and Medical Ontologies: Systems Biology Ontology (SBO)
Summary
book-chapter
Using GMQL-web for querying, downloading and integrating public with private genomic datasets
Summary
conference-paper
Biological and medical ontologies: Systems biology ontology (SBO)
Published by
Encyclopedia of Bioinformatics and Computational Biology: ABC of Bioinformatics
Summary
book-chapter
Ontology-Driven Metadata Enrichment for Genomic Datasets
Summary
conference-paper
Overview of GeCo: A project for exploring and integrating signals from the genome
Published by
Communications in Computer and Information Science
Summary
conference-paper
Overview of GeCo: A Project for Exploring and Integrating Signals from the Genome
Summary
book-chapter
OpenGDC: standardizing, extending, and integrating genomics data of cancer
Summary
conference-paper
Biological and medical ontologies: Disease ontology (DO)
Published by
Encyclopedia of Bioinformatics and Computational Biology: ABC of Bioinformatics
Summary
book-chapter
Biological and medical ontologies: Human phenotype ontology (HPO)
Published by
Encyclopedia of Bioinformatics and Computational Biology: ABC of Bioinformatics
Summary
book-chapter
Integrating Topological Proofs with Model Checking to Instrument Iterative Design
Published by
ArXiv
Summary
journal-article
Integrating topological proofs with model checking to instrument Iterative design
Published by
arXiv
Summary
other
Ontology-driven metadata enrichment for genomic datasets
Published by
CEUR Workshop Proceedings
Summary
conference-paper
From model checking to a temporal proof for partial models
Summary
conference-paper
From model checking to a temporal proof for partial models: Preliminary example
Published by
arXiv
Summary
other
Conceptual modeling for genomics: Building an integrated repository of open data
Published by
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Summary
conference-paper
Conceptual Modeling for Genomics: Building an Integrated Repository of Open Data
Published by
Lecture Notes in Computer Science
Summary
journal-article
From Model Checking to a Temporal Proof for Partial Models
Published by
Lecture Notes in Computer Science
Summary
journal-article
From model checking to a temporal proof for partial models
Published by
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Summary
conference-paper
Conceptual modeling for genomics: Building an integrated repository of open data
Summary
conference-paper