Alexi Nott

Work

Imperial College London
|

Lecturer (Assistant Professor)

United Kingdom of Great Britain and Northern Ireland

Imperial College London
|

Group Leader

United Kingdom of Great Britain and Northern Ireland

Imperial College London
|

Edmond and Lily Safra Research Fellow

United Kingdom of Great Britain and Northern Ireland

Imperial College London
|

Advanced Research Fellow

United Kingdom of Great Britain and Northern Ireland

University of California San Diego
|

Assistant Project Scientist

US

Massachusetts Institute of Technology
|

Postdoctoral Associate

US

University College London

United Kingdom of Great Britain and Northern Ireland

Education

University College London
United Kingdom of Great Britain and Northern Ireland

Ph.D.

University of Bath
United Kingdom of Great Britain and Northern Ireland

MBiochem

Publications

Artificial intelligence for neurodegenerative experimental models

Published by

Alzheimer's and Dementia

Summary

journal-article

DAF-FM detection of nitric oxide in embryonic cortical neurons

Published by

Protocol exchange

Summary

journal-article

CHAS infers cell type-specific signatures in bulk brain histone acetylation studies of neurological and psychiatric disorders

Published by

Cell Reports: Methods

Summary

journal-article

Enhanced differentiation of neural progenitor cells in Alzheimer’s disease into vulnerable immature neurons

Published by

iScience

Summary

journal-article

Genetic risk for neurodegenerative conditions is linked to disease-specific microglial pathways

Published by

PLOS Genetics

Summary

journal-article

Genetic risk for neurodegenerative conditions is linked to disease-specific microglial pathways

Published by

PLoS Genetics

Summary

journal-article

Integrated multi-omic characterizations of the synapse reveal RNA processing factors and ubiquitin ligases associated with neurodevelopmental disorders

Published by

Cell Systems

Summary

journal-article

CUT&Tag recovers up to half of ENCODE ChIP-seq histone acetylation peaks

Published by

Nature Communications

Summary

journal-article

CUT&Tag recovers up to half of ENCODE ChIP-seq histone acetylation peaks

Published by

Nature Communications

Summary

journal-article

Cell state-dependent allelic effects and contextual Mendelian randomization analysis for human brain phenotypes

Published by

Nature Genetics

Summary

journal-article

Cell state-dependent allelic effects and contextual Mendelian randomization analysis for human brain phenotypes

Published by

Nature Genetics

Summary

journal-article

Spatial mapping of Alzheimer’s disease across genetic subtypes

Published by

Nature Genetics

Summary

journal-article

Spatial mapping of Alzheimer's disease across genetic subtypes

Published by

Nature Genetics

Summary

journal-article

CHAS, A DECONVOLUTION TOOL, INFERS CELL TYPE-SPECIFIC SIGNATURES IN BULK BRAIN HISTONE ACETYLATION STUDIES OF BRAIN DISORDERS

Published by

European Neuropsychopharmacology

Summary

conference-paper

FANS Unfixed: Isolation and Proteomic Analysis of Mouse Cell Type-Specific Brain Nuclei

Published by

Journal of Proteome Research

Summary

journal-article

FANS unfixed: isolation and proteomic analysis of mouse cell type-specific brain nuclei

Published by

Journal of Proteome Research

Summary

journal-article

Genetic risk for neurodegenerative conditions is linked to disease-specific microglial pathways

Summary

preprint

Genetic risk for neurodegenerative conditions is linked to disease-specific microglial pathways

Summary

other

The inactive X chromosome drives sex differences in microglial inflammatory activity in human glioblastoma

Summary

journal-article

The inactive X chromosome drives sex differences in microglial inflammatory activity in human glioblastoma

Summary

preprint

Interpretation of Neurodegenerative GWAS Risk Alleles in Microglia and their Interplay with Other Cell Types

Published by

Advances in neurobiology

Summary

journal-article

Genetic insights into immune mechanisms of Alzheimer's and Parkinson's disease

Published by

Frontiers in Immunology

Summary

journal-article

Artificial intelligence for neurodegenerative experimental models

Published by

Alzheimer's & Dementia

Summary

journal-article

Label-free three-photon imaging of intact human cerebral organoids for tracking early events in brain development and deficits in Rett syndrome

Published by

eLife

Summary

journal-article

Label-free three-photon imaging of intact human cerebral organoids for tracking early events in brain development and deficits in Rett syndrome

Published by

eLife

Summary

journal-article

Somatic mosaicism reveals clonal distributions of neocortical development

Published by

Nature

Summary

journal-article

CUT&Tag recovers up to half of ENCODE ChIP-seq peaks

Summary

online-resource

CUT&Tag recovers up to half of ENCODE ChIP-seq histone acetylation peaks

Summary

preprint

Label-free three-photon imaging of intact human cerebral organoids: tracking early events in brain development and deficits in Rett Syndrome

Summary

journal-article

Label-free three-photon imaging of intact human cerebral organoids: tracking early events in brain development and deficits in Rett Syndrome

Summary

preprint

CHAS, a deconvolution tool, infers cell type-specific signatures in bulk brain histone acetylation studies of neurological and psychiatric disorders

Summary

journal-article

CHAS, a deconvolution tool, infers cell type-specific signatures in bulk brain histone acetylation studies of neurological and psychiatric disorders

Summary

preprint

Nuclei isolation of multiple brain cell types for omics interrogation

Published by

Nature Protocols

Summary

journal-article

Nuclei isolation of multiple brain cell types for omics interrogation

Published by

Nature Protocols

Summary

journal-article

Phosphoproteomics identifies microglial Siglec‐F inflammatory response during neurodegeneration

Published by

Molecular Systems Biology

Summary

journal-article

Phosphoproteomics identifies microglial Siglec‐F inflammatory response during neurodegeneration

Published by

Molecular Systems Biology

Summary

journal-article

Somatic mosaicism in the mature brain reveals clonal cellular distributions during cortical development

Summary

preprint

Somatic mosaicism in the mature brain reveals clonal cellular distributions during cortical development

Summary

journal-article

HDAC1 modulates OGG1-initiated oxidative DNA damage repair in the aging brain and Alzheimer's disease

Published by

Nature Communications

Summary

journal-article

Phosphoproteomics identifies microglial Siglec-F inflammatory response during neurodegeneration

Summary

preprint

Brain cell type-specific enhancer-promoter interactome maps and disease-risk association

Published by

Science

Summary

journal-article

Brain cell type–specific enhancer–promoter interactome maps and disease - risk association

Published by

Science

Summary

journal-article

Cell type-specific enhancer-promoter connectivity maps in the human brain and disease risk association

Summary

journal-article

Cell type-specific enhancer-promoter connectivity maps in the human brain and disease risk association

Summary

other

Immune memory in the brain

Published by

Nature

Summary

journal-article

Immune memory in the brain

Published by

Nature

Summary

journal-article

A Functional Switch of NuRD Chromatin Remodeling Complex Subunits Regulates Mouse Cortical Development

Published by

Cell Reports

Summary

journal-article

A Functional Switch of NuRD Chromatin Remodeling Complex Subunits Regulates Mouse Cortical Development

Published by

Cell Reports

Summary

journal-article

Chd8 mediates cortical neurogenesis via transcriptional regulation of cell cycle and Wnt signaling

Published by

Nature Neuroscience

Summary

journal-article

Chd8 mediates cortical neurogenesis via transcriptional regulation of cell cycle and Wnt signaling

Published by

Nature Neuroscience

Summary

journal-article

Histone deacetylase 3 associates with MeCP2 to regulate FOXO and social behavior

Published by

Nature Neuroscience

Summary

journal-article

Histone deacetylase 3 associates with MeCP2 to regulate FOXO and social behavior

Published by

Nature Neuroscience

Summary

journal-article

S-nitrosation of proteins relevant to Alzheimer's disease during early stages of neurodegeneration

Published by

Proceedings of the National Academy of Sciences of USA

Summary

journal-article

S-nitrosation of proteins relevant to Alzheimer’s disease during early stages of neurodegeneration

Published by

Proceedings of the National Academy of Sciences

Summary

journal-article

Decoding the S-nitroso proteome in a mouse model of Alzheimer's by SNOTRAP and mass spectrometry - clues for altered signaling pathways

Published by

ACS National Meeting Book of Abstracts

Summary

conference-paper

Activity-induced DNA breaks govern the expression of neuronal early-response genes

Published by

Cell

Summary

journal-article

Activity-Induced DNA Breaks Govern the Expression of Neuronal Early-Response Genes

Published by

Cell

Summary

journal-article

HDAC2 expression in parvalbumin interneurons regulates synaptic plasticity in the mouse visual cortex

Published by

Neuroepigenetics

Summary

journal-article

HDAC2 expression in parvalbumin interneurons regulates synaptic plasticity in the mouse visual cortex

Published by

Neuroepigenetics

Summary

journal-article

S-nitrosylation of HDAC2 regulates the expression of the chromatin-remodeling factor Brm during radial neuron migration

Published by

Proceedings of the National Academy of Sciences of USA

Summary

journal-article

HDAC Inhibitors as Novel Therapeutics in Aging and Alzheimer's Disease

Published by

EPIGENETIC REGULATION IN THE NERVOUS SYSTEM: BASIC MECHANISMS AND CLINICAL IMPACT

Summary

book-chapter

The Top3β way to untangle RNA

Published by

Nature Neuroscience

Summary

journal-article

List of Contributors

Published by

Epigenetic Regulation in the Nervous System

Summary

other

HDAC Inhibitors as Novel Therapeutics in Aging and Alzheimer’s Disease

Published by

Epigenetic Regulation in the Nervous System

Summary

other

The Top3β way to untangle RNA

Published by

Nat Neurosci

Summary

journal-article

List of Contributors

Summary

book-chapter

Nitric oxide-mediated epigenetic mechanisms in developing neurons

Published by

Cell Cycle

Summary

journal-article

Nitric Oxide-mediated epigenetic mechanisms in developing neurons

Published by

Cell Cycle

Summary

journal-article

S-nitrosylation of histone deacetylase 2 induces chromatin remodelling in neurons

Published by

Nature

Summary

journal-article

<i>S</i>-nitrosylation of histone deacetylase 2 induces chromatin remodelling in neurons

Published by

Nature

Summary

journal-article

DAF-FM detection of nitric oxide in embryonic cortical neurons

Published by

Protocol Exchange

Summary

journal-article

Dorsal hippocampal α7 and α4β2 nicotinic receptors and memory

Published by

Brain Research

Summary

journal-article

Dorsal hippocampal α7 and α4β2 nicotinic receptors and memory

Published by

Brain Research

Summary

journal-article