Lucille Lopez-Delisle

Work

UNIGE
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Scientific collaborator

Switzerland

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École Polytechnique Fédérale de Lausanne
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Post-doc

Switzerland

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EPFL - École Polytechnique Fédérale de Lausanne

Switzerland

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EPFL - École Polytechnique Fédérale de Lausanne

Switzerland

→

Institut Curie
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PhD student

France

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Publications

Co-option of an ancestral cloacal regulatory landscape during digit evolution

Published by

Nature

Summary

journal-article

Fine-tuning mechanical constraints reveals uncoupled patterning and gene expression programs in murine gastruloids

Published by

Development

Summary

journal-article

Size-dependent temporal decoupling of morphogenesis and transcriptional programs in pseudo-embryos

Published by

Science Advances

Summary

journal-article

Size-dependent temporal decoupling of morphogenesis and transcriptional programs in pseudoembryos

Published by

Science Advances

Summary

journal-article

Fine-tuning mechanical constraints uncouples patterning and gene expression in murine pseudo-embryos

Summary

preprint

WNT signaling coordinately controls mouse limb bud outgrowth and establishment of the digit-interdigit pattern

Summary

preprint

Size-dependent temporal decoupling of morphogenesis and transcriptional programs in gastruloids

Summary

preprint

CTCF-dependent insulation of Hoxb13 and the heterochronic control of tail length

Published by

Proceedings of the National Academy of Sciences

Summary

journal-article

CTCF-DEPENDENT INSULATION OFHoxb13AND THE HETEROCHRONIC CONTROL OF TAIL LENGTH

Summary

preprint

Pre-hypertrophic chondrogenic enhancer landscape of limb and axial skeleton development

Published by

Nature Communications

Summary

journal-article

The Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update.

Published by

Nucleic acids research

Summary

journal-article

Evolutionary Co-Option of an Ancestral Cloacal Regulatory Landscape During the Emergence of Digits and Genitals

Summary

preprint

Cadherins modulate the self-organizing potential of gastruloids

Summary

preprint

Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos

Published by

Nature Genetics

Summary

journal-article

Chondrogenic Enhancer Landscape of Limb and Axial Skeleton Development

Summary

preprint

baredSC: Bayesian approach to retrieve expression distribution of single-cell data

Published by

BMC Bioinformatics

Summary

journal-article

Sequential And Directional Insulation By Conserved CTCF Sites Underlies The Hox Timer In Pseudo-Embryos

Summary

preprint

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update.

Published by

Nucleic acids research

Summary

journal-article

Context-dependent enhancer function revealed by targeted inter-TAD relocation

Published by

Nature Communications

Summary

journal-article

Developmental and evolutionary comparative analysis of a regulatory landscape in mouse and chicken

Published by

Development

Summary

journal-article

Context-Dependent Enhancer Function Revealed by Targeted Inter-TAD Relocation

Summary

preprint

Sequential in cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse HoxD cluster

Published by

Genes & Development

Summary

journal-article

Mesomelic dysplasias associated with the HOXD locus are caused by regulatory reallocations

Published by

Nature Communications

Summary

journal-article

Sequential in-cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse HoxD cluster

Summary

other

Induction of a chromatin boundary in vivo upon insertion of a TAD border

Published by

PLOS Genetics

Summary

journal-article

Time-sequenced transcriptomes of developing distal mouse limb buds: A comparative tissue layer analysis.

Published by

Developmental dynamics : an official publication of the American Association of Anatomists

Summary

journal-article

baredSC: Bayesian Approach to Retrieve Expression Distribution of Single-Cell

Summary

other

pyGenomeTracks: reproducible plots for multivariate genomic datasets 

Published by

Bioinformatics

Summary

journal-article

Dbx2 regulation in limbs suggests interTAD sharing of enhancers.

Published by

Developmental dynamics : an official publication of the American Association of Anatomists

Summary

journal-article

Mammalian-specific ectodermal enhancers control the expression of Hoxc genes in developing nails and hair follicles

Published by

Proceedings of the National Academy of Sciences

Summary

journal-article

Chromatin topology and the timing of enhancer function at the <i>HoxD</i> locus.

Published by

Proceedings of the National Academy of Sciences of the United States of America

Summary

journal-article

Chromatin topology and the timing of enhancer function at the hoxd locus

Summary

other

Chromatin topology and the timing of enhancer function at the HoxD locus

Published by

Proceedings of the National Academy of Sciences

Summary

journal-article

Chromatin topology and the timing of enhancer function at the <i>HoxD</i> locus.

Published by

Proceedings of the National Academy of Sciences of the United States of America

Summary

journal-article

Chromatin topology and the timing of enhancer function at theHoxDlocus

Published by

Proceedings of the National Academy of Sciences

Summary

journal-article

HOX13-MEDIATEDDBX2REGULATION IN LIMBS SUGGESTS INTER-TAD SHARING OF ENHANCERS

Summary

preprint

SPECIFIC ECTODERMAL ENHANCERS CONTROL THE EXPRESSION OF Hoxc GENES IN DEVELOPING MAMMALIAN INTEGUMENTS

Summary

other

A complex regulatory landscape involved in the development of mammalian external genitals.

Published by

eLife

Summary

journal-article

A Complex Regulatory Landscape Involved In The Development Of External Genitals

Summary

other

The constrained architecture of mammalian Hox gene clusters

Published by

Proceedings of the National Academy of Sciences

Summary

journal-article

Impact of genome architecture on the functional activation and repression of Hox regulatory landscapes.

Published by

BMC biology

Summary

journal-article

Constrained Transcriptional Polarity in the Organization of MammalianHoxGene Clusters

Summary

other

Impact of Genome Architecture Upon the Functional Activation and Repression of Hox Regulatory Landscapes

Summary

other

Similarities and differences in the regulation of HoxD genes during chick and mouse limb development

Published by

PLOS Biology

Summary

journal-article

Conservation and Variations of Bimodal HoxD Gene Regulation During Tetrapod Limb Development

Summary

other

Role of Hoxc genes in the development of the limb integumentary organ (nail, claw, or hoof).

Published by

FASEB journal : official publication of the Federation of American Societies for Experimental Biology

Summary

journal-article

Activated ALK signals through the ERK–ETV5–RET pathway to drive neuroblastoma oncogenesis

Published by

Oncogene

Summary

journal-article

The ALK receptor in sympathetic neuron development and neuroblastoma.

Published by

Cell and tissue research

Summary

journal-article

The HoxD cluster is a dynamic and resilient TAD boundary controlling the segregation of antagonistic regulatory landscapes.

Published by

Genes & development

Summary

journal-article

THE HOXD CLUSTER IS A DYNAMIC AND RESILIENT TAD BOUNDARY CONTROLLING THE SEGREGATION OF ANTAGONISTIC REGULATORY LANDSCAPES

Summary

other

Large scale genomic reorganization of topological domains at the HoxD locus

Published by

Genome Biology

Summary

journal-article

Activated Alk triggers prolonged neurogenesis and Ret upregulation providing a therapeutic target in ALK-mutated neuroblastoma

Published by

Oncotarget

Summary

journal-article

Hyperactivation of Alk induces neonatal lethality in knock-in Alk<sup>F1178L</sup> mice

Published by

Oncotarget

Summary

journal-article