Université François Rabelais de Tours, UFR Sciences pharmaceutiques
France
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Pharm.D.
Publications
De novo whole genome assembly of the globally invasive green shore crab Carcinus maenas (Linnaeus, 1758) via long-read Oxford Nanopore MinION sequencing
Summary
preprint
detectEVE: Fast, Sensitive and Precise Detection of Endogenous Viral Elements in Genomic Data
Published by
Molecular Ecology Resources
Summary
journal-article
Comparative performance of viral landscape phylogeography approaches
Published by
Proceedings of the National Academy of Sciences of the United States of America
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journal-article
detectEVE
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Molecular Ecology Resources
Summary
journal-article
Comparative performance of novel viral landscape phylogeography approaches
Summary
preprint
Dengue-mediated changes in the vectorial capacity of Aedes aegypti (Diptera: Culicidae): manipulation of transmission or infection by-product?
Published by
Journal of Medical Entomology
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journal-article
Comparative performance of viral landscape phylogeography approaches
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Proceedings of the National Academy of Sciences
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journal-article
Dengue-mediated changes in the vectorial capacity of Aedes aegypti (Diptera: Culicidae)
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Journal of Medical Entomology
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journal-article
Endogenous viral elements: insights into data availability and accessibility
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Virus Evolution
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journal-article
Endogenous viral elements
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Virus Evolution
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journal-article
detectEVE: fast, sensitive and precise detection of endogenous viral elements in genomic data
Summary
preprint
A tale of caution: How endogenous viral elements affect virus discovery in transcriptomic data
Published by
Virus Evolution
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journal-article
A tale of caution
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Virus Evolution
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journal-article
Highly divergent CRESS DNA and picorna-like viruses associated with bleached thalli of the green seaweed Ulva
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Microbiology Spectrum
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journal-article
The sociality continuum of viruses: a commentary on Leeks et al. 2023
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Journal of Evolutionary Biology
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journal-article
The sociality continuum of viruses
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Journal of Evolutionary Biology
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journal-article
Highly divergent CRESS DNA and picorna-like viruses associated with bleached thalli of the green seaweed Ulva
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Microbiology Spectrum
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journal-article
Chikungunya intra-vector dynamics in Aedes albopictus from Lyon (France) upon exposure to a human viremia-like dose range reveals vector barrier’s permissiveness and supports local epidemic potential
Published by
Peer Community Journal
Summary
journal-article
Chikungunya intra-vector dynamics in Aedes albopictus from Lyon (France) upon exposure to a human viremia-like dose range reveals vector barrier’s permissiveness and supports local epidemic potential
Published by
Peer Community Journal
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journal-article
A tale of caution: How endogenous viral elements affect virus discovery in transcriptomic data
Summary
preprint
Phylogeographic analysis of dengue virus serotype 1 and cosmopolitan serotype 2 in Africa
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International Journal of Infectious Diseases
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journal-article
Phylogeographic analysis of dengue virus serotype 1 and cosmopolitan serotype 2 in Africa
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International Journal of Infectious Diseases
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Mutational analysis of Aedes aegypti Dicer 2 provides insights into the biogenesis of antiviral exogenous small interfering RNAs
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PLOS Pathogens
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Mutational analysis of Aedes aegypti Dicer 2 provides insights into the biogenesis of antiviral exogenous small interfering RNAs
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PLoS Pathogens
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Endogenous viral elements in shrew genomes provide insights into Pestivirus ancient history
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Molecular Biology and Evolution
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journal-article
Aquatic Flaviviruses
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Journal of Virology
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Aquatic flaviviruses
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Journal of Virology
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First report of Pepo aphid-borne yellows virus infecting watermelon (Citrullus lanatus) in Uganda
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New Disease Reports
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journal-article
The Viral Susceptibility of the Haloferax Species
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Viruses
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The Viral Susceptibility of the <i>Haloferax</i> Species
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Viruses
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The viral susceptibility of the Haloferax species
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Viruses
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journal-article
Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic
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Nature Communications
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Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic
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Nature Communications
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Innate immune pathways act synergistically to constrain RNA virus evolution in Drosophila melanogaster
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Nature Ecology & Evolution
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Innate immune pathways act synergistically to constrain RNA virus evolution in Drosophila melanogaster
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Nature Ecology & Evolution
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Chikungunya intra-vector dynamics inAedes albopictusfrom Lyon (France) upon exposure to a human viremia-like dose range reveals vector barrier’s permissiveness and supports local epidemic potential
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preprint
Recent African strains of Zika virus display higher transmissibility and fetal pathogenicity than Asian strains
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Nature Communications
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journal-article
Molecular detection and genomic characterization of diverse hepaciviruses in African rodents
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Virus Evolution
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journal-article
Innate immune pathways act synergistically to constrain RNA virus evolution in Drosophila melanogaster
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other
Recent African strains of Zika virus display higher transmissibility and fetal pathogenicity than Asian strains
Published by
Nature Communications
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journal-article
Potential role of vector-mediated natural selection in dengue virus genotype/lineage replacements in two epidemiologically contrasted settings
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Emerging Microbes and Infections
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Measles virus and rinderpest virus divergence dated to the sixth century BCE
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Science
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Modeling intra-mosquito dynamics of Zika virus and its dose-dependence confirms the low epidemic potential of Aedes albopictus
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PLOS Pathogens
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Modeling intra-mosquito dynamics of Zika virus and its dose-dependence confirms the low epidemic potential of Aedes albopictus
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PLoS Pathogens
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Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework
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Nature Communications
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Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework
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Nature Communications
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Experimental adaptation of dengue virus 1 to Aedes albopictus mosquitoes by in vivo selection
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Scientific Reports
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journal-article
Épisode 1 - La Lumière de l'Évolution
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image
Épisode 2 - Reconstruire le Passé
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image
Épisode 3 - Comprendre les Épidémies
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image
Een verhelderende kijk in het duistere verleden
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Analyse
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journal-article
Non-retroviral Endogenous Viral Element Limits Cognate Virus Replication in Aedes aegypti Ovaries
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Current Biology
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journal-article
Non-retroviral endogenous viral element limits cognate virus replication in Aedes aegypti ovaries
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Current Biology
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journal-article
Wolbachia modulates prevalence and viral load of Culex pipiens densoviruses in natural populations.
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Molecular ecology
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journal-article
Wolbachia modulates prevalence and viral load of Culex pipiens densoviruses in natural populations
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Molecular Ecology
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journal-article
Wolbachia modulates prevalence and viral load of Culex pipiens densoviruses in natural populations
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Molecular Ecology
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journal-article
nosoi: A stochastic agent‐based transmission chain simulation framework in r
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Methods in Ecology and Evolution
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journal-article
nosoi
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Methods in ecology and evolution
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journal-article
Measles virus and rinderpest virus divergence dated to the sixth century BCE
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Science
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journal-article
Genomic Epidemiology of 2015-2016 Zika Virus Outbreak in Cape Verde.
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Emerging infectious diseases
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Genomic epidemiology of 2015-2016 Zika virus outbreak in Cape Verde
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Emerging Infectious Diseases
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journal-article
nosoi: a stochastic agent-based transmission chain simulation framework in R
Summary
preprint
Novel genome sequences of cell-fusing agent virus allow comparison of virus phylogeny with the genetic structure of Aedes aegypti populations
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Virus Evolution
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journal-article
Novel genome sequences of cell-fusing agent virus allow comparison of virus phylogeny with the genetic structure of Aedes aegypti populations
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Virus Evolution
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journal-article
nosoi package for R
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software
Cell-Fusing Agent Virus Reduces Arbovirus Dissemination in Aedes aegypti Mosquitoes In Vivo
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Journal of Virology
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journal-article
Evolution and phylogeography of Culex pipiens densovirus
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Virus Evolution
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journal-article
Cell-fusing agent virus reduces arbovirus dissemination in Aedes aegypti mosquitoes in vivo
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Journal of Virology
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RNA Structure Duplication in the Dengue Virus 3' UTR: Redundancy or Host Specificity?
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mBio
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journal-article
RNA structure duplication in the dengue virus 3' UTR
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mBio
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journal-article
Epidemiological significance of dengue virus genetic variation in mosquito infection dynamics
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PLOS Pathogens
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journal-article
Epidemiological significance of dengue virus genetic variation in mosquito infection dynamics
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PLoS Pathogens
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journal-article
A Survey of Virus Recombination Uncovers Canonical Features of Artificial Chimeras Generated During Deep Sequencing Library Preparation.
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G3 (Bethesda, Md.)
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journal-article
A Survey of Virus Recombination Uncovers Canonical Features of Artificial Chimeras Generated During Deep Sequencing Library Preparation
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G3&#58; Genes|Genomes|Genetics
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journal-article
A survey of virus recombination uncovers canonical features of artificial chimeras generated during deep sequencing library preparation
Published by
G3 : Genes, Genomes, Genetics
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journal-article
Full-genome dengue virus sequencing in mosquito saliva shows lack of convergent positive selection during transmission by Aedes aegypti
Published by
Virus Evolution
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journal-article
Full-genome dengue virus sequencing in mosquito saliva shows lack of convergent positive selection during transmission by Aedes aegypti
Published by
Virus Evolution
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journal-article
Discovery of flavivirus-derived endogenous viral elements in Anopheles mosquito genomes supports the existence of Anopheles-associated insect-specific flaviviruses.
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Virus evolution
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journal-article
Discovery of flavivirus-derived endogenous viral elements in Anopheles mosquito genomes supports the existence of Anopheles-associated insect-specific flaviviruses
Published by
Virus Evolution
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journal-article
Discovery of flavivirus-derived endogenous viral elements in twoAnophelesmosquito genomes supports the existence ofAnopheles-associated insect-specific flaviviruses
Summary
preprint
Genetic Drift, Purifying Selection and Vector Genotype Shape Dengue Virus Intra-host Genetic Diversity in Mosquitoes
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PLOS Genetics
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journal-article
Genetic drift, purifying selection and vector genotype shape dengue virus intra-host genetic diversity in mosquitoes
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PLoS genetics
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journal-article
Determinants of Arbovirus Vertical Transmission in Mosquitoes
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PLoS Pathog
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Determinants of arbovirus vertical transmission in mosquitoes
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PLoS Pathogens
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Excretion of dengue virus RNA by Aedes aegypti allows non-destructive monitoring of viral dissemination in individual mosquitoes
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Sci. Rep.
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journal-article
Excretion of dengue virus RNA by Aedes aegypti allows non-destructive monitoring of viral dissemination in individual mosquitoes
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Scientific Reports
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journal-article
Evolutionary dynamics of dengue virus populations within the mosquito vector
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Current Opinion in Virology
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journal-article
Evolutionary dynamics of dengue virus populations within the mosquito vector
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Current opinion in virology
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journal-article
Vertical transmission of arboviruses in mosquitoes: A historical perspective
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Infection, Genetics and Evolution
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journal-article
Vertical transmission of arboviruses in mosquitoes
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Infection genetics and evolution
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journal-article
Covering all bases in HIV research: unveiling a hidden world of viral evolution.